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  5. Cre13.g568650

Cre13.g568650


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component


Gene families : OG_01_0000966 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g568650
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT3G04840 No alias Ribosomal protein S3Ae 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G34670 No alias Ribosomal protein S3Ae 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07031.1 No alias component eS1 of SSU proteome 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!