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  5. Cre13.g569850

Cre13.g569850


Description : Solute transport.channels.AMT family.ammonium transporter (AMT1-type)


Gene families : OG_01_0000238 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g569850
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT3G24300 No alias ammonium transporter 1;3 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G28700 No alias ammonium transporter 1;4 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_18430V3.1 No alias ammonium transporter 1;1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s397_40V3.1 No alias ammonium transporter 1;2 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00111.1 No alias ammonium transporter (AMT1) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005216 ion channel activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 57 482
No external refs found!