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  5. Cre13.g578100

Cre13.g578100


No description available


Gene families : OG_01_0002573 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g578100
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Mp6g01090.1 No alias NUP205 scaffold nucleoporin of nuclear pore complex 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_13260V3.1 No alias Protein of unknown function (DUF3414) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021827 Nup186/Nup192/Nup205 487 927
IPR021827 Nup186/Nup192/Nup205 3 168
IPR021827 Nup186/Nup192/Nup205 1049 1799
No external refs found!