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  5. AT1G50880

AT1G50880


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G50880
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26510 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30920 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30930 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31080 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53790 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53815 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G59690 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G71290 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02660 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02890 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G47140 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49450 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09190 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15670 No alias F-box family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22791 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44220 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 21 61
IPR013187 F-box-assoc_dom_typ3 176 229
IPR013187 F-box-assoc_dom_typ3 144 171
PLAZA 3.0 Dicots AT1G50880