AT1G51190

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_01_0000132 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G51190
Cluster	HCCA: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
AT1G79700	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_2780V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	NAS	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0007389	pattern specification process	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019827	stem cell population maintenance	IMP	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048364	root development	IGI	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
MF	GO:0004789	thiamine-phosphate diphosphorylase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005811	lipid droplet	IEP	HCCA
BP	GO:0006772	thiamine metabolic process	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
MF	GO:0008902	hydroxymethylpyrimidine kinase activity	IEP	HCCA
MF	GO:0008970	phospholipase A1 activity	IEP	HCCA
MF	GO:0008972	phosphomethylpyrimidine kinase activity	IEP	HCCA
BP	GO:0009228	thiamine biosynthetic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009647	skotomorphogenesis	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009956	radial pattern formation	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010080	regulation of floral meristem growth	IEP	HCCA
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	HCCA
BP	GO:0010540	basipetal auxin transport	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
MF	GO:0022821	potassium ion antiporter activity	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0030308	negative regulation of cell growth	IEP	HCCA
BP	GO:0032507	maintenance of protein location in cell	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0034308	primary alcohol metabolic process	IEP	HCCA
BP	GO:0034309	primary alcohol biosynthetic process	IEP	HCCA
BP	GO:0035265	organ growth	IEP	HCCA
BP	GO:0042343	indole glucosinolate metabolic process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	HCCA
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0045185	maintenance of protein location	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	HCCA
MF	GO:0047714	galactolipase activity	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0051457	maintenance of protein location in nucleus	IEP	HCCA
BP	GO:0051651	maintenance of location in cell	IEP	HCCA
BP	GO:0060771	phyllotactic patterning	IEP	HCCA
BP	GO:0060772	leaf phyllotactic patterning	IEP	HCCA
BP	GO:0060774	auxin mediated signaling pathway involved in phyllotactic patterning	IEP	HCCA
BP	GO:0072595	maintenance of protein localization in organelle	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0090333	regulation of stomatal closure	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	190	248
IPR001471	AP2/ERF_dom	293	342

External Links

PLAZA 3.0 Dicots	AT1G51190

AT1G51190

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation