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  5. Cre16.g662951

Cre16.g662951


Description : E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana


Gene families : OG_01_0001782 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001782_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g662951
Cluster HCCA: Cluster_94


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR010730 HET 244 390
IPR002110 Ankyrin_rpt 1141 1166
IPR020683 Ankyrin_rpt-contain_dom 939 999
IPR020683 Ankyrin_rpt-contain_dom 643 734
IPR020683 Ankyrin_rpt-contain_dom 1215 1307
IPR020683 Ankyrin_rpt-contain_dom 1318 1402
IPR020683 Ankyrin_rpt-contain_dom 1043 1137
IPR020683 Ankyrin_rpt-contain_dom 1498 1586
IPR020683 Ankyrin_rpt-contain_dom 786 867
IPR020683 Ankyrin_rpt-contain_dom 871 933
No external refs found!