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  5. Cre16.g668550

Cre16.g668550


No description available


Gene families : OG_01_0003542 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g668550
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g11370.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 497 626
IPR000306 Znf_FYVE 316 380
No external refs found!