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  5. Cre16.g671750

Cre16.g671750


Description : Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component


Gene families : OG_01_0008653 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g671750
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G08780 No alias ABI3-interacting protein 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g17400.1 No alias component PFD4 of Prefoldin co-chaperone complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_6640V3.1 No alias ABI3-interacting protein 3 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
CC GO:0016272 prefoldin complex IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002777 PFD_beta-like 15 119
No external refs found!