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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS26 component
Gene families : OG_01_0001481 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001481_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre16.g682300 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G40510 | No alias | Ribosomal protein S26e family protein | 0.25 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G40590 | No alias | Ribosomal protein S26e family protein | 0.13 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G56340 | No alias | Ribosomal protein S26e family protein | 0.23 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp2g06210.1 | No alias | component RPS26 of SSU proteome | 0.32 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c16_9210V3.1 | No alias | Ribosomal protein S26e family protein | 0.32 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c5_16070V3.1 | No alias | Ribosomal protein S26e family protein | 0.39 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c6_8910V3.1 | No alias | Ribosomal protein S26e family protein | 0.41 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_02019.1 | No alias | component eS26 of SSU proteome | 0.4 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| CC | GO:0009512 | cytochrome b6f complex | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| CC | GO:0070069 | cytochrome complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000892 | Ribosomal_S26e | 1 | 108 |
| No external refs found! |