Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component
Gene families : OG_01_0007346 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007346_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre17.g697350 | |
Cluster | HCCA: Cluster_116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Pp3c9_17380V3.1 | No alias | modifier of snc1,4 | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006397 | mRNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription, elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0016272 | prefoldin complex | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030880 | RNA polymerase complex | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008409 | SPF27 | 29 | 228 |
No external refs found! |