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AT1G53270


Description : ABC-2 type transporter family protein


Gene families : OG_01_0000376 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53270
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Pp3c18_7000V3.1 No alias ABC-2 type transporter family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_34730V3.1 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004845 uracil phosphoribosyltransferase activity IEP HCCA
MF GO:0004849 uridine kinase activity IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006222 UMP biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0008655 pyrimidine-containing compound salvage IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0010138 pyrimidine ribonucleotide salvage IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010962 regulation of glucan biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
BP GO:0032262 pyrimidine nucleotide salvage IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP HCCA
BP GO:0032950 regulation of beta-glucan metabolic process IEP HCCA
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0044206 UMP salvage IEP HCCA
BP GO:0046049 UMP metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:1901141 regulation of lignin biosynthetic process IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
BP GO:2000904 regulation of starch metabolic process IEP HCCA
BP GO:2001006 regulation of cellulose biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 51 201
IPR013525 ABC_2_trans 333 543
PLAZA 3.0 Dicots AT1G53270