Cre17.g720050

Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component

Gene families : OG_01_0004746 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004746_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g720050
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AT1G06430	No alias	FTSH protease 8	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g19200.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_22830V3.1	No alias	FtsH extracellular protease family	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03766.1	No alias	component FtsH1/2/5/6/8 of FtsH plastidial protease complexes	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0098809	nitrite reductase activity	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	466	654
IPR003959	ATPase_AAA_core	253	384

External Links

No external refs found!

Cre17.g720050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation