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  5. Cre17.g735400

Cre17.g735400


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component


Gene families : OG_01_0000836 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000836_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g735400
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT2G06530 No alias SNF7 family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_6090V3.1 No alias vacuolar protein sorting-associated protein 2.3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01819.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 181
No external refs found!