- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Flagellar radial spoke protein 4 OS=Chlamydomonas reinhardtii (sp|q01656|rsp4_chlre : 168.0)
Gene families : OG_01_0007468 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007468_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g00390.1 | |
| Cluster | HCCA: Cluster_91 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre05.g242500 | No alias | Flagellar radial spoke protein 4 OS=Chlamydomonas reinhardtii | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Cre05.g242550 | No alias | Flagellar radial spoke protein 6 OS=Chlamydomonas reinhardtii | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c17_730V3.1 | No alias | No annotation | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0001534 | radial spoke | IEA | Interproscan |
| BP | GO:0060271 | cilium assembly | IEA | Interproscan |
| BP | GO:0060294 | cilium movement involved in cell motility | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003352 | regulation of cilium movement | IEP | HCCA |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | HCCA |
| CC | GO:0005856 | cytoskeleton | IEP | HCCA |
| CC | GO:0005929 | cilium | IEP | HCCA |
| BP | GO:0006873 | cellular ion homeostasis | IEP | HCCA |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030003 | cellular cation homeostasis | IEP | HCCA |
| BP | GO:0030026 | cellular manganese ion homeostasis | IEP | HCCA |
| CC | GO:0031514 | motile cilium | IEP | HCCA |
| BP | GO:0032879 | regulation of localization | IEP | HCCA |
| BP | GO:0032886 | regulation of microtubule-based process | IEP | HCCA |
| BP | GO:0040011 | locomotion | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| CC | GO:0042995 | cell projection | IEP | HCCA |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | HCCA |
| BP | GO:0048870 | cell motility | IEP | HCCA |
| BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
| BP | GO:0050801 | ion homeostasis | IEP | HCCA |
| BP | GO:0051270 | regulation of cellular component movement | IEP | HCCA |
| BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
| BP | GO:0055071 | manganese ion homeostasis | IEP | HCCA |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
| BP | GO:0055080 | cation homeostasis | IEP | HCCA |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
| BP | GO:0060632 | regulation of microtubule-based movement | IEP | HCCA |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
| CC | GO:0120025 | plasma membrane bounded cell projection | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006802 | Radial_spoke | 5 | 536 |
| No external refs found! |