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  5. Mp1g04550.1

Mp1g04550.1


Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG_01_0000706 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000706_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g04550.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT3G48590 No alias nuclear factor Y, subunit C1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G63470 No alias nuclear factor Y, subunit C4 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_7060V3.1 No alias nuclear factor Y, subunit C2 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_4450V3.1 No alias nuclear factor Y, subunit C1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 100 163
No external refs found!