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AT1G55510


Description : branched-chain alpha-keto acid decarboxylase E1 beta subunit


Gene families : OG_01_0004167 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55510
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre06.g311050 No alias Amino acid metabolism.degradation.branched-chain amino... 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g10430.1 No alias subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_1720V3.1 No alias Transketolase family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02841.1 No alias subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity ISS Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003978 UDP-glucose 4-epimerase activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004075 biotin carboxylase activity IEP HCCA
MF GO:0004084 branched-chain-amino-acid transaminase activity IEP HCCA
MF GO:0004147 dihydrolipoamide branched chain acyltransferase activity IEP HCCA
MF GO:0004301 epoxide hydrolase activity IEP HCCA
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP HCCA
MF GO:0004485 methylcrotonoyl-CoA carboxylase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004753 saccharopine dehydrogenase activity IEP HCCA
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005779 integral component of peroxisomal membrane IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0006552 leucine catabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006554 lysine catabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006559 L-phenylalanine catabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006572 tyrosine catabolic process IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009068 aspartate family amino acid catabolic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009083 branched-chain amino acid catabolic process IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
CC GO:0010008 endosome membrane IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010189 vitamin E biosynthetic process IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016417 S-acyltransferase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016801 hydrolase activity, acting on ether bonds IEP HCCA
MF GO:0016803 ether hydrolase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019336 phenol-containing compound catabolic process IEP HCCA
BP GO:0019477 L-lysine catabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030523 dihydrolipoamide S-acyltransferase activity IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031231 intrinsic component of peroxisomal membrane IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
CC GO:0035061 interchromatin granule IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042360 vitamin E metabolic process IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043617 cellular response to sucrose starvation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0046369 galactose biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046440 L-lysine metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047130 saccharopine dehydrogenase (NADP+, L-lysine-forming) activity IEP HCCA
MF GO:0050373 UDP-arabinose 4-epimerase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
MF GO:0051117 ATPase binding IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0070547 L-tyrosine aminotransferase activity IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901999 homogentisate metabolic process IEP HCCA
BP GO:1902000 homogentisate catabolic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR033248 Transketolase_C 223 342
IPR005475 Transketolase-like_Pyr-bd 33 206
PLAZA 3.0 Dicots AT1G55510