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  5. AT1G55620

AT1G55620


Description : chloride channel F


Gene families : OG_01_0001735 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55620
Cluster HCCA: Cluster_265


Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISS Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0006821 chloride transport ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004633 phosphopantothenoylcysteine decarboxylase activity IEP HCCA
MF GO:0004845 uracil phosphoribosyltransferase activity IEP HCCA
MF GO:0004849 uridine kinase activity IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005884 actin filament IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006222 UMP biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008655 pyrimidine-containing compound salvage IEP HCCA
BP GO:0009051 pentose-phosphate shunt, oxidative branch IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
CC GO:0010008 endosome membrane IEP HCCA
BP GO:0010070 zygote asymmetric cell division IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010138 pyrimidine ribonucleotide salvage IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010962 regulation of glucan biosynthetic process IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016303 1-phosphatidylinositol-3-kinase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019432 triglyceride biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
CC GO:0031902 late endosome membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032262 pyrimidine nucleotide salvage IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032585 multivesicular body membrane IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP HCCA
BP GO:0032950 regulation of beta-glucan metabolic process IEP HCCA
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035004 phosphatidylinositol 3-kinase activity IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0044206 UMP salvage IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045324 late endosome to vacuole transport IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046049 UMP metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity IEP HCCA
CC GO:0048471 perinuclear region of cytoplasm IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
MF GO:0052742 phosphatidylinositol kinase activity IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
MF GO:0071617 lysophospholipid acyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090351 seedling development IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901141 regulation of lignin biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1990064 ground tissue pattern formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
BP GO:2000904 regulation of starch metabolic process IEP HCCA
BP GO:2001006 regulation of cellulose biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 490 553
IPR000644 CBS_dom 423 476
IPR001807 Cl-channel_volt-gated 26 351
PLAZA 3.0 Dicots AT1G55620