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  5. AT1G55940

AT1G55940


Description : cytochrome P450, family 708, subfamily A, polypeptide 1


Gene families : OG_01_0001246 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55940
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT1G12740 No alias cytochrome P450, family 87, subfamily A, polypeptide 2 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44970 No alias Cytochrome P450 superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0019825 oxygen binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004046 aminoacylase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009712 catechol-containing compound metabolic process IEP HCCA
BP GO:0009713 catechol-containing compound biosynthetic process IEP HCCA
BP GO:0009801 cinnamic acid ester metabolic process IEP HCCA
BP GO:0009802 cinnamic acid ester biosynthetic process IEP HCCA
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010421 hydrogen peroxide-mediated programmed cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
BP GO:0036474 cell death in response to hydrogen peroxide IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
MF GO:0047617 acyl-CoA hydrolase activity IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
MF GO:0090430 caffeoyl-CoA: alcohol caffeoyl transferase activity IEP HCCA
BP GO:0090431 alkyl caffeate ester biosynthetic process IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
BP GO:2000652 regulation of secondary cell wall biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 33 143
IPR001128 Cyt_P450 181 622
PLAZA 3.0 Dicots AT1G55940