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  5. Mp1g16700.1

Mp1g16700.1


Description : scaffolding component CKS of cyclin-dependent kinase complex


Gene families : OG_01_0004354 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g16700.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre03.g180350 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_6200V3.1 No alias CDK-subunit 2 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000789 Cyclin-dep_kinase_reg-sub 4 70
No external refs found!