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  5. Mp1g16770.1

Mp1g16770.1


Description : component alpha type-3 of 26S proteasome


Gene families : OG_01_0002439 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g16770.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT3G22110 No alias 20S proteasome alpha subunit C1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g418100 No alias Protein degradation.26S proteasome.20S core... 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_12990V3.1 No alias 20S proteasome alpha subunit C1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_28170V3.1 No alias 20S proteasome alpha subunit C1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_9140V3.1 No alias 20S proteasome alpha subunit C1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_14386.1 No alias component alpha type-3 of 26S proteasome 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 214
IPR000426 Proteasome_asu_N 5 27
No external refs found!