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  5. AT1G56520

AT1G56520


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG_01_0000012 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56520
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G17055 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25505 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25510 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09360 No alias NB-ARC domain-containing disease resistance protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16857 No alias No description available 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16960 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G40100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41550 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0004383 guanylate cyclase activity IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006182 cGMP biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009190 cyclic nucleotide biosynthetic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0019904 protein domain specific binding IEP HCCA
MF GO:0030275 LRR domain binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0046068 cGMP metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0052652 cyclic purine nucleotide metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 13 178
IPR011713 Leu-rich_rpt_3 603 622
IPR002182 NB-ARC 196 426
PLAZA 3.0 Dicots AT1G56520