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  5. Mp1g22700.1

Mp1g22700.1


Description : alpha-class expansin


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g22700.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 No alias expansin A7 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20190 No alias expansin 11 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G62980 No alias expansin A18 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G69530 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28950 No alias expansin A6 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G37640 No alias Barwin-like endoglucanases superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40610 No alias expansin A8 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G29030 No alias expansin A5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G01630 No alias expansin A17 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39270 No alias expansin A22 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39280 No alias expansin A23 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39300 No alias expansin A25 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g18610.1 No alias alpha-class expansin 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g09770.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g20420.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g18860.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_4560V3.1 No alias expansin A9 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_20360V3.1 No alias expansin A9 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19690V3.1 No alias expansin A16 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19720V3.1 No alias expansin A1 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_5780V3.1 No alias expansin A15 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_1850V3.1 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_760V3.1 No alias expansin A1 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_15400V3.1 No alias expansin A15 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_16280V3.1 No alias expansin A14 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_870V3.1 No alias expansin A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 71 152
IPR007117 Expansin_CBD 163 240
No external refs found!