1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G56553

AT1G56553


Description : LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G15757.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG_01_0000554 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000554_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56553
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT1G15757 No alias Molecular chaperone Hsp40/DnaJ family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61688 No alias Defensin-like (DEFL) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G12465 No alias low-molecular-weight cysteine-rich 50 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G12475 No alias Defensin-like (DEFL) family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G20463 No alias Defensin-like (DEFL) family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G20465 No alias Molecular chaperone Hsp40/DnaJ family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G08505 No alias Defensin-like (DEFL) family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42223 No alias Defensin-like (DEFL) family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42235 No alias Expressed protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59105 No alias Defensin-like (DEFL) family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity IEP HCCA
BP GO:0006885 regulation of pH IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0007035 vacuolar acidification IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP HCCA
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0010023 proanthocyanidin biosynthetic process IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP HCCA
BP GO:0030641 regulation of cellular pH IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0042330 taxis IEP HCCA
MF GO:0045544 gibberellin 20-oxidase activity IEP HCCA
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP HCCA
BP GO:0045851 pH reduction IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
BP GO:0051452 intracellular pH reduction IEP HCCA
BP GO:0051453 regulation of intracellular pH IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G56553