AT1G57580

Description : F-box family protein

Gene families : OG_01_0001079 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G57580
Cluster	HCCA: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
AT1G20240	No alias	SWI-SNF-related chromatin binding protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20360	No alias	F-box family protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20690	No alias	SWI-SNF-related chromatin binding protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20735	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20795	No alias	F-box family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20800	No alias	F-box family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20940	No alias	F-box family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003883	CTP synthase activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
BP	GO:0080117	secondary growth	IEP	HCCA
BP	GO:0080190	lateral growth	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT1G57580