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  5. Mp1g26370.1

Mp1g26370.1


Description : isoleucine-tRNA ligase


Gene families : OG_01_0005261 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g26370.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT5G49030 No alias tRNA synthetase class I (I, L, M and V) family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g689871 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_5990V3.1 No alias tRNA synthetase class I (I, L, M and V) family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01722.2 No alias isoleucine-tRNA ligase 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005534 galactose binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0048029 monosaccharide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 828 992
IPR002300 aa-tRNA-synth_Ia 133 783
No external refs found!