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  5. AT1G57730

AT1G57730


Description : RING/U-box superfamily protein


Gene families : OG_01_0009707 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G57730
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT1G70910 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G77830 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 159
PLAZA 3.0 Dicots AT1G57730
HCCA BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA BP GO:0046451 diaminopimelate metabolic process IEP HCCA BP GO:0046483 heterocycle metabolic process IEP HCCA MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP HCCA BP GO:0048285 organelle fission IEP HCCA BP GO:0048518 positive regulation of biological process IEP HCCA BP GO:0048522 positive regulation of cellular process IEP HCCA BP GO:0051055 negative regulation of lipid biosynthetic process IEP HCCA BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA BP GO:0051252 regulation of RNA metabolic process IEP HCCA BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA BP GO:0051640 organelle localization IEP HCCA BP GO:0051644 plastid localization IEP HCCA BP GO:0051656 establishment of organelle localization IEP HCCA BP GO:0051667 establishment of plastid localization IEP HCCA MF GO:0052381 tRNA dimethylallyltransferase activity IEP HCCA BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA BP GO:0055114 obsolete oxidation-reduction process IEP HCCA BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA BP GO:0061024 membrane organization IEP HCCA BP GO:0062014 negative regulation of small molecule metabolic process IEP HCCA MF GO:0070180 large ribosomal subunit rRNA binding IEP HCCA BP GO:0071071 regulation of phospholipid biosynthetic process IEP HCCA BP GO:0071072 negative regulation of phospholipid biosynthetic process IEP HCCA BP GO:0071103 DNA conformation change IEP HCCA BP GO:0071704 organic substance metabolic process IEP HCCA BP GO:0072521 purine-containing compound metabolic process IEP HCCA BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA BP GO:0080090 regulation of primary metabolic process IEP HCCA BP GO:0080158 obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis IEP HCCA BP GO:0090304 nucleic acid metabolic process IEP HCCA BP GO:0090407 organophosphate biosynthetic process IEP HCCA MF GO:0097159 organic cyclic compound binding IEP HCCA MF GO:0097367 carbohydrate derivative binding IEP HCCA BP GO:0097659 nucleic acid-templated transcription IEP HCCA BP GO:0098869 cellular oxidant detoxification IEP HCCA MF GO:0140097 catalytic activity, acting on DNA IEP HCCA MF GO:0140098 catalytic activity, acting on RNA IEP HCCA MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA BP GO:1901259 chloroplast rRNA processing IEP HCCA MF GO:1901265 nucleoside phosphate binding IEP HCCA BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA BP GO:1901360 organic cyclic compound metabolic process IEP HCCA BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA MF GO:1901363 heterocyclic compound binding IEP HCCA BP GO:1901564 organonitrogen compound metabolic process IEP HCCA BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA BP GO:1901576 organic substance biosynthetic process IEP HCCA BP GO:1901605 alpha-amino acid metabolic process IEP HCCA BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA BP GO:1903725 regulation of phospholipid metabolic process IEP HCCA BP GO:1903726 negative regulation of phospholipid metabolic process IEP HCCA BP GO:1990748 cellular detoxification IEP HCCA BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000184 Bac_surfAg_D15 486 801
PLAZA 3.0 Dicots AT3G46740