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  5. AT1G58270

AT1G58270


Description : TRAF-like family protein


Gene families : OG_01_0000182 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G58270
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT2G04190 No alias TRAF-like family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20380 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G28220 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09770 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09780 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26280 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26290 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26300 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 110 213
IPR002083 MATH/TRAF_dom 267 373
PLAZA 3.0 Dicots AT1G58270