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  5. AT1G59630

AT1G59630


Description : F-box associated ubiquitination effector family protein


Gene families : OG_01_0000237 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G59630
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT1G12170 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32430 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G51290 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G51320 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G58090 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G14710 No alias F-box family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G17310 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16580 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G18340 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G51171 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59590 No alias jacalin lectin family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59610 No alias F-box family protein / jacalin lectin family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004448 isocitrate dehydrogenase activity IEP HCCA
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006102 isocitrate metabolic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009786 regulation of asymmetric cell division IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP HCCA
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 83 234
PLAZA 3.0 Dicots AT1G59630