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  5. Mp2g20400.1

Mp2g20400.1


Description : pri-miRNA recruitment factor (STV1). component RPL24 of LSU proteome component


Gene families : OG_01_0000808 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g20400.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT2G36620 No alias ribosomal protein L24 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G53020 No alias Ribosomal protein L24e family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g391097 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_10770V3.1 No alias ribosomal protein L24 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_16170V3.1 No alias ribosomal protein L24 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_10840V3.1 No alias ribosomal protein L24 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_8930V3.1 No alias Ribosomal protein L24e family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_25160V3.1 No alias ribosomal protein L24 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_25170V3.1 No alias ribosomal protein L24 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07905.1 No alias component eL24 of LSU proteome component 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 4 67
No external refs found!