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  5. Mp3g00030.1

Mp3g00030.1


Description : CDC20-type (APC/C)-dependent ubiquitination activator protein


Gene families : OG_01_0000364 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g00030.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT4G33260 No alias Transducin family protein / WD-40 repeat family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G33270 No alias Transducin family protein / WD-40 repeat family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_3130V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_3140V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_6330V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 190 245
IPR001680 WD40_repeat 274 306
IPR001680 WD40_repeat 407 441
IPR001680 WD40_repeat 319 357
No external refs found!