AT1G61940


Description : tubby like protein 4


Gene families : OG_01_0000361 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G61940
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Mp6g12440.1 No alias transcription factor (TUB) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source
MF GO:0004335 galactokinase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004396 hexokinase activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 1 48
IPR000007 Tubby_C 100 181
PLAZA 3.0 Dicots AT1G61940