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  5. Mp3g07610.1

Mp3g07610.1


Description : histone demethylase (PKDM9). transcription factor (JUMONJI)


Gene families : OG_01_0008305 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g07610.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_24630V3.1 No alias relative of early flowering 6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_8710V3.1 No alias Zinc finger (C2H2 type) family protein / transcription... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004677 DNA-dependent protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR003349 JmjN 17 50
IPR003347 JmjC_dom 316 453
No external refs found!