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  5. Mp3g11830.1

Mp3g11830.1


Description : auxin efflux transporter (ABCB19). subfamily ABCB transporter


Gene families : OG_01_0000146 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g11830.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT2G47000 No alias ATP binding cassette subfamily B4 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G62150 No alias P-glycoprotein 21 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G01830 No alias P-glycoprotein 5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G18050 No alias P-glycoprotein 9 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g725200 No alias ABC transporter B family member 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_34680V3.1 No alias P-glycoprotein 10 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 429 577
IPR003439 ABC_transporter-like_ATP-bd 1084 1232
IPR011527 ABC1_TM_dom 745 1015
IPR011527 ABC1_TM_dom 88 360
No external refs found!