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Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer
Gene families : OG_01_0000042 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp4g05990.1 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Mp7g08140.1 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c15_22720V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c15_22730V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c19_1840V3.1 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c2_4100V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c3_14510V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c3_18750V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c3_20140V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_08256.1 | No alias | "small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | HCCA |
| BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000894 | RuBisCO_ssu_dom | 71 | 179 |
| No external refs found! |