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  5. Mp4g06050.1

Mp4g06050.1


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG_01_0000042 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g06050.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G67090 No alias ribulose bisphosphate carboxylase small chain 1A 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_15786V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_15800V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_16000V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_16130V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_22730V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_1840V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_4100V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_14510V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_18750V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_20110V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_20140V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15633.1 No alias "small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 71 179
No external refs found!