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  5. AT1G64540

AT1G64540


Description : F-box/FBD-like domains containing protein


Gene families : OG_01_0000021 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G64540
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52650 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29930 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44060 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58860 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58880 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58920 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59170 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59230 No alias RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59240 No alias RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G62440 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15620 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G25860 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38396 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41630 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex IEP HCCA
MF GO:0004034 aldose 1-epimerase activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0005302 L-tyrosine transmembrane transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0015173 aromatic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015179 L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 145 169
IPR001810 F-box_dom 7 41
PLAZA 3.0 Dicots AT1G64540