Mp4g13330.1

Description : DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 147.0)

Gene families : OG_01_0002282 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002282_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp4g13330.1
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp4g13160.1	No alias	DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis...	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g13210.1	No alias	DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis...	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	132	227
IPR011545	DEAD/DEAH_box_helicase_dom	12	107

External Links

No external refs found!