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  5. Mp4g20140.1

Mp4g20140.1


Description : E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana (sp|q9m2s6|sdir1_arath : 92.8)


Gene families : OG_01_0007304 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g20140.1
Cluster HCCA: Cluster_104


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004555 alpha,alpha-trehalase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015927 trehalase activity IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 834 877
No external refs found!