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AT1G65920


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain


Gene families : OG_01_0000631 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G65920
Cluster HCCA: Cluster_30


Type GO Term Name Evidence Source
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000913 preprophase band assembly IEP HCCA
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
MF GO:0010328 auxin influx transmembrane transporter activity IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0015203 polyamine transmembrane transporter activity IEP HCCA
BP GO:0015846 polyamine transport IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
CC GO:0030863 cortical cytoskeleton IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
CC GO:0030981 cortical microtubule cytoskeleton IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046622 positive regulation of organ growth IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048639 positive regulation of developmental growth IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000123 positive regulation of stomatal complex development IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 311 359
IPR000408 Reg_chr_condens 529 578
IPR000408 Reg_chr_condens 413 462
IPR000408 Reg_chr_condens 478 526
IPR000408 Reg_chr_condens 582 630
IPR000306 Znf_FYVE 640 699
IPR001849 PH_domain 17 123
IPR027988 BRX_N 839 871
IPR013591 Brevis_radix_dom 948 1002
PLAZA 3.0 Dicots AT1G65920