1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp5g01620.1

Mp5g01620.1


Description : SNM interstrand crosslink repair factor


Gene families : OG_01_0001416 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001416_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g01620.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre12.g513254 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011084 DRMBL 457 563
IPR001279 Metallo-B-lactamas 261 409
No external refs found!