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  5. AT1G66500

AT1G66500


Description : Pre-mRNA cleavage complex II


Gene families : OG_01_0012107 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G66500
Cluster HCCA: Cluster_80


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
CC GO:0000419 RNA polymerase V complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004335 galactokinase activity IEP HCCA
MF GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005673 transcription factor TFIIE complex IEP HCCA
CC GO:0005945 6-phosphofructokinase complex IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006041 glucosamine metabolic process IEP HCCA
BP GO:0006042 glucosamine biosynthetic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007135 meiosis II IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0008076 voltage-gated potassium channel complex IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0010326 methionine-oxo-acid transaminase activity IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
CC GO:0016602 CCAAT-binding factor complex IEP HCCA
MF GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030173 integral component of Golgi membrane IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0031099 regeneration IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031228 intrinsic component of Golgi membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034705 potassium channel complex IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0045732 positive regulation of protein catabolic process IEP HCCA
BP GO:0046349 amino sugar biosynthetic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP HCCA
MF GO:0046592 polyamine oxidase activity IEP HCCA
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP HCCA
MF GO:0047635 alanine-oxo-acid transaminase activity IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0061983 meiosis II cell cycle process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070529 L-tryptophan aminotransferase activity IEP HCCA
MF GO:0070546 L-phenylalanine aminotransferase activity IEP HCCA
MF GO:0070547 L-tyrosine aminotransferase activity IEP HCCA
MF GO:0070548 L-glutamine aminotransferase activity IEP HCCA
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP HCCA
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP HCCA
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP HCCA
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP HCCA
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G66500