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  5. Mp5g07020.1

Mp5g07020.1


Description : plastidial ribosome hibernation-promoting factor (PSRP1)


Gene families : OG_01_0003869 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003869_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g07020.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT5G24490 No alias 30S ribosomal protein, putative 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre05.g237450 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_22260V3.1 No alias 30S ribosomal protein, putative 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_1350V3.1 No alias 30S ribosomal protein, putative 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02860.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004555 alpha,alpha-trehalase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0015927 trehalase activity IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR032528 Ribosom_S30AE_C 237 290
IPR003489 RHF/RaiA 102 198
No external refs found!