1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G67340

AT1G67340


Description : HCP-like superfamily protein with MYND-type zinc finger


Gene families : OG_01_0000796 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000796_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G67340
Cluster HCCA: Cluster_162


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
CC GO:0000785 chromatin IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000794 condensed nuclear chromosome IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0042644 chloroplast nucleoid IEP HCCA
CC GO:0042646 plastid nucleoid IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 306 346
PLAZA 3.0 Dicots AT1G67340