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  5. AT1G67360

AT1G67360


Description : Rubber elongation factor protein (REF)


Gene families : OG_01_0003489 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G67360
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Mp8g12140.1 No alias associated factor (LDAP) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004512 inositol-3-phosphate synthase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005782 peroxisomal matrix IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006986 response to unfolded protein IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
MF GO:0016688 L-ascorbate peroxidase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031907 microbody lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034620 cellular response to unfolded protein IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0035967 cellular response to topologically incorrect protein IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043462 regulation of ATPase activity IEP HCCA
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071277 cellular response to calcium ion IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR008802 REF 8 207
PLAZA 3.0 Dicots AT1G67360