AT1G68130

Description : indeterminate(ID)-domain 14

Gene families : OG_01_0002633 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002633_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G68130
Cluster	HCCA: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp1g15660.1	No alias	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043621	protein self-association	IPI	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0046982	protein heterodimerization activity	IPI	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000904	regulation of starch metabolic process	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000578	embryonic axis specification	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008142	oxysterol binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009942	longitudinal axis specification	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
MF	GO:0010011	auxin binding	IEP	HCCA
BP	GO:0010015	root morphogenesis	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEP	HCCA
MF	GO:0010331	gibberellin binding	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
MF	GO:0016615	malate dehydrogenase activity	IEP	HCCA
MF	GO:0019840	isoprenoid binding	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
MF	GO:0032934	sterol binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0042562	hormone binding	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
BP	GO:0071241	cellular response to inorganic substance	IEP	HCCA
BP	GO:0071249	cellular response to nitrate	IEP	HCCA
BP	GO:0080022	primary root development	IEP	HCCA
MF	GO:0080161	auxin transmembrane transporter activity	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1901699	cellular response to nitrogen compound	IEP	HCCA
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013087	Znf_C2H2_type	70	92

External Links

PLAZA 3.0 Dicots	AT1G68130

AT1G68130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation