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  5. Mp5g22790.1

Mp5g22790.1


Description : component HAF/TAF1 of SAGA transcription co-activator complex. component HAF/TAF1 of TFIId basal transcription regulation complex. protein kinase (TAF)


Gene families : OG_01_0001575 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g22790.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G32750 No alias HAC13 protein (HAC13) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g425501 No alias Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_1870V3.1 No alias HAC13 protein (HAC13) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_10948.1 No alias component HAF/TAF1 of SAGA transcription co-activator complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 1969 2042
IPR022591 TFIID_sub1_DUF3591 634 1206
IPR009067 TAF_II_230-bd 26 69
IPR000626 Ubiquitin-like_dom 720 790
IPR041670 Znf-CCHC_6 1483 1505
No external refs found!