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  5. AT1G68660

AT1G68660


Description : Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein


Gene families : OG_01_0007259 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G68660
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre17.g696400 No alias Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_21920V3.1 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003730 mRNA 3'-UTR binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010110 regulation of photosynthesis, dark reaction IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010117 photoprotection IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0018149 peptide cross-linking IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0018316 peptide cross-linking via L-cystine IEP HCCA
BP GO:0019253 reductive pentose-phosphate cycle IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019685 photosynthesis, dark reaction IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0034059 response to anoxia IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0043487 regulation of RNA stability IEP HCCA
BP GO:0043488 regulation of mRNA stability IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071454 cellular response to anoxia IEP HCCA
BP GO:0071484 cellular response to light intensity IEP HCCA
BP GO:0080152 regulation of reductive pentose-phosphate cycle IEP HCCA
BP GO:0080153 negative regulation of reductive pentose-phosphate cycle IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
BP GO:1904062 regulation of cation transmembrane transport IEP HCCA
BP GO:1905156 negative regulation of photosynthesis IEP HCCA
InterPro domains Description Start Stop
IPR003769 ClpS_core 79 145
PLAZA 3.0 Dicots AT1G68660