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  5. Mp6g05510.1

Mp6g05510.1


Description : endo-beta-1,4-xylanase


Gene families : OG_01_0001900 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001900_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g05510.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT1G10050 No alias glycosyl hydrolase family 10 protein /... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_10270V3.1 No alias glycosyl hydrolase family 10 protein /... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 399 543
IPR003305 CenC_carb-bd 231 364
IPR003305 CenC_carb-bd 50 179
IPR001000 GH10_dom 605 863
No external refs found!