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  5. Mp6g09980.1

Mp6g09980.1


Description : component beta type-1 of 26S proteasome


Gene families : OG_01_0005802 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g09980.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT4G31300 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g279000 No alias Protein degradation.26S proteasome.20S core... 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_17380V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005216 ion channel activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 15 195
No external refs found!