AT1G69350

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0000019 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G69350
Cluster	HCCA: Cluster_232

Target	Alias	Description	ECC score	Gene Family Method
AT2G22410	No alias	SLOW GROWTH 1	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G15130	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23330	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G29230	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49170	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G04370	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13650	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G33170	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.19	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G16860	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52850	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	569	615
IPR002885	Pentatricopeptide_repeat	369	415
IPR002885	Pentatricopeptide_repeat	266	313
IPR002885	Pentatricopeptide_repeat	166	213
IPR002885	Pentatricopeptide_repeat	469	516
IPR002885	Pentatricopeptide_repeat	443	468
IPR002885	Pentatricopeptide_repeat	645	666
IPR002885	Pentatricopeptide_repeat	140	165

External Links

PLAZA 3.0 Dicots	AT1G69350